upgrade to MH 11.1

Hello,

i upgraded my MH QUANT 10.1 to 11.1 and since then the batch.script doesn't work for me, we are using a modified component.config, do you know where the error could be? This component.config worked with all 10 versions of masshunter (10,10.1 and 10.2)

Thank you.

Top Replies

PavelK over 1 year ago in reply to howard_sanford +1

Hello, we have latest framework 4.8 and framework 3.5 SP1, it works fine with MH 10.1. community.agilent.com/.../component.config.xml
PavelK over 1 year ago in reply to CBM +1

Hi, sorry i can't share our script, but i can share testing script for compilation purposes. It still doesn't work on MH 11.1, compilation of methods from IScriptableInterface does not work when uploading…
howard_sanford over 1 year ago in reply to CBM +1

CBM and PavelK , The issue has been duplicated by product support. Once there is an update or resolution I will post more information.

Parents

0 CBM over 1 year ago

First of all, thank you for posting publicly, I had not noticed this interface feature of MassHunter Quant, it looks very useful.

Were you able to get it working in 11.1?

If you're allowed to share your "IScriptable" folder, I would be very interested in seeing an use example. I am University/Government employed in Denmark, if that helps regarding permissions.

I am aware it will not function fully on my machine, but csc.exe indicates some compiling failing at the initialization, and you don't seem to be referencing any internal dll, so I should get far enough that I might be able to reproduce or not, and if it doesn't fail on my machine, you can get a hint at what is wrong.
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0 PavelK over 1 year ago in reply to CBM

Hi, sorry i can't share our script, but i can share testing script for compilation purposes. It still doesn't work on MH 11.1, compilation of methods from IScriptableInterface does not work when uploading a batch. You must create IScriptable folder like this C:\MassHunter\Scripts\Quant\IScriptable\Batch_Script.txt"> and copy that batch_script.txt into , and copy component.config.xml here C:\Program Files\Agilent\MassHunter\Workstation\Quant\bin, make backup of that component.config.

Fullscreen 2818.component.config.xml Download

<?xml version="1.0" encoding="utf-8"?>
<components>
  <defaultnamespace>Agilent.MassSpectrometry.DataAnalysis.Quantitative</defaultnamespace>
  <references>
    <reference framework="true" assembly="System.Data.dll"/>
    <reference framework="true" assembly="System.Data.DataSetExtensions.dll"/>
    <reference framework="true" assembly="System.Xml.dll"/>
    <reference framework="true" assembly="System.Web.Services.dll"/>
    <reference framework="false" assembly="Quantitation.dll"/>
    <reference framework="false" assembly="QuantUtils.dll"/>
    <reference framework="false" assembly="ScriptableInterfaces.dll"/>
    <reference framework="true" assembly="System.Linq.dll"/>
    <reference framework="true" assembly="System.Core.dll"/>
    <reference framework="true" assembly="System.Xml.Linq.dll"/>
    <reference framework="true" assembly="System.Windows.Forms.dll"/>
    <reference framework="true" assembly="System.Threading.Tasks.dll"/>
    <reference framework="true" assembly="System.Drawing.dll"/>
    <reference framework="true" assembly="System.Net.dll"/>
    <reference framework="true" assembly="System.IO.dll"/>
  </references>
  <interface name="IScriptableSample">
    <implementation assembly="CompoundMath_Script.dll">
      <script name="CompoundMath_Script.txt">
        <references>
          <reference framework="false" assembly="BatchAnalysis.dll"/>
        </references>
      </script>
    </implementation>
  </interface>
  <interface name="ICustomExpressions">
    <implementation assembly="C:\MassHunter\Scripts\Quant\IScriptable\CustomExpressions_Script.dll">
      <script name="C:\MassHunter\Scripts\Quant\IScriptable\CustomExpressions_Script.cs">
        <references>
        </references>
      </script>
    </implementation>
  </interface>
  <!--<interface name="IScriptableBatch">
    <implementation assembly="C:\MassHunter\Scripts\Quant\IScriptable\Batch_Script.dll">
      <script name="C:\MassHunter\Scripts\Quant\IScriptable\Batch_Script.txt">
        <references>
          <reference framework="false" assembly="BatchAnalysis.dll"/>
        </references>
      </script>
    </implementation>
  </interface>-->
  <interface name="IScriptableBatch">
    <implementation assembly="C:\MassHunter\Scripts\Quant\IScriptable\Batch_Script.dll">
      <script name="C:\MassHunter\Scripts\Quant\IScriptable\Batch_Script.txt">
        <references>
          <reference framework="false" assembly="BatchAnalysis.dll"/>
          <reference framework="true" assembly="System.Data.dll"/>
          <reference framework="true" assembly="System.Linq.dll"/>
          <!--<reference framework="true" assembly="System.Linq.Enumerable.dll"/>-->
          <reference framework="true" assembly="System.Data.DataSetExtensions.dll"/>
          <reference framework="true" assembly="System.Collections.dll"/>
          <reference framework="true" assembly="System.Xml.Linq.dll"/>
          <reference framework="true" assembly="System.IO.dll"/>
          <reference framework="true" assembly="System.Xml.dll"/>
          <reference framework="true" assembly="System.Core.dll"/>
          <reference framework="true" assembly="System.Threading.Tasks.dll"/>
          <reference framework="true" assembly="System.Net.dll"/>
        </references>
      </script>
    </implementation>
  </interface>
  <interface name="IScriptableOutlier" instanceName="Accuracy">
    <implementation assembly="OutlierAccuracy_Script.dll">
      <script name="OutlierAccuracy_Script.txt">
        <references>
        </references>
      </script>
    </implementation>
  </interface>
  <interface name="IScriptableSample">
    <implementation assembly="Sample_Script.dll">
      <script name="Sample_Script.txt">
        <references>
        </references>
      </script>
    </implementation>
  </interface>
  <interface name="IScriptableCompound">
    <implementation assembly="Compound_Script.dll">
      <script name="Compound_Script.txt">
        <references>
        </references>
      </script>
    </implementation>
  </interface>
  <interface name="IScriptableQuantifierIon">
    <implementation assembly="QuantifierIon_Script.dll">
      <script name="QuantifierIon_Script.txt">
        <references>
        </references>
      </script>
    </implementation>
  </interface>
  <interface name="IScriptableQualifierIon">
    <implementation assembly="QualifierIon_Script.dll">
      <script name="QualifierIon_Script.txt">
        <references>
        </references>
      </script>
    </implementation>
  </interface>
</components>

Fullscreen Batch_Script.txt Download

using System;
using Agilent.MassSpectrometry.DataAnalysis.Quantitative;

namespace ScriptTest
{
    internal class Batch_Script
    {
    }

    public class ScriptableBatch : IScriptableBatch
    {
        public void _OnBatchAnalysisStarting(QuantitationDataSet dataSet, short batchId)
        {
            // ALS Implementation
        }

        public void _OnBatchAnalyzed(QuantitationDataSet dataSet, short batchId)
        {
            // ALS Implementation
        }

        public void _OnBatchLoaded(QuantitationDataSet dataSet, short batchId)
        {
            // ALS Implementation
        }
    }
}

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0 PavelK over 1 year ago in reply to CBM

Fullscreen 2818.component.config.xml Download

<?xml version="1.0" encoding="utf-8"?>
<components>
  <defaultnamespace>Agilent.MassSpectrometry.DataAnalysis.Quantitative</defaultnamespace>
  <references>
    <reference framework="true" assembly="System.Data.dll"/>
    <reference framework="true" assembly="System.Data.DataSetExtensions.dll"/>
    <reference framework="true" assembly="System.Xml.dll"/>
    <reference framework="true" assembly="System.Web.Services.dll"/>
    <reference framework="false" assembly="Quantitation.dll"/>
    <reference framework="false" assembly="QuantUtils.dll"/>
    <reference framework="false" assembly="ScriptableInterfaces.dll"/>
    <reference framework="true" assembly="System.Linq.dll"/>
    <reference framework="true" assembly="System.Core.dll"/>
    <reference framework="true" assembly="System.Xml.Linq.dll"/>
    <reference framework="true" assembly="System.Windows.Forms.dll"/>
    <reference framework="true" assembly="System.Threading.Tasks.dll"/>
    <reference framework="true" assembly="System.Drawing.dll"/>
    <reference framework="true" assembly="System.Net.dll"/>
    <reference framework="true" assembly="System.IO.dll"/>
  </references>
  <interface name="IScriptableSample">
    <implementation assembly="CompoundMath_Script.dll">
      <script name="CompoundMath_Script.txt">
        <references>
          <reference framework="false" assembly="BatchAnalysis.dll"/>
        </references>
      </script>
    </implementation>
  </interface>
  <interface name="ICustomExpressions">
    <implementation assembly="C:\MassHunter\Scripts\Quant\IScriptable\CustomExpressions_Script.dll">
      <script name="C:\MassHunter\Scripts\Quant\IScriptable\CustomExpressions_Script.cs">
        <references>
        </references>
      </script>
    </implementation>
  </interface>
  <!--<interface name="IScriptableBatch">
    <implementation assembly="C:\MassHunter\Scripts\Quant\IScriptable\Batch_Script.dll">
      <script name="C:\MassHunter\Scripts\Quant\IScriptable\Batch_Script.txt">
        <references>
          <reference framework="false" assembly="BatchAnalysis.dll"/>
        </references>
      </script>
    </implementation>
  </interface>-->
  <interface name="IScriptableBatch">
    <implementation assembly="C:\MassHunter\Scripts\Quant\IScriptable\Batch_Script.dll">
      <script name="C:\MassHunter\Scripts\Quant\IScriptable\Batch_Script.txt">
        <references>
          <reference framework="false" assembly="BatchAnalysis.dll"/>
          <reference framework="true" assembly="System.Data.dll"/>
          <reference framework="true" assembly="System.Linq.dll"/>
          <!--<reference framework="true" assembly="System.Linq.Enumerable.dll"/>-->
          <reference framework="true" assembly="System.Data.DataSetExtensions.dll"/>
          <reference framework="true" assembly="System.Collections.dll"/>
          <reference framework="true" assembly="System.Xml.Linq.dll"/>
          <reference framework="true" assembly="System.IO.dll"/>
          <reference framework="true" assembly="System.Xml.dll"/>
          <reference framework="true" assembly="System.Core.dll"/>
          <reference framework="true" assembly="System.Threading.Tasks.dll"/>
          <reference framework="true" assembly="System.Net.dll"/>
        </references>
      </script>
    </implementation>
  </interface>
  <interface name="IScriptableOutlier" instanceName="Accuracy">
    <implementation assembly="OutlierAccuracy_Script.dll">
      <script name="OutlierAccuracy_Script.txt">
        <references>
        </references>
      </script>
    </implementation>
  </interface>
  <interface name="IScriptableSample">
    <implementation assembly="Sample_Script.dll">
      <script name="Sample_Script.txt">
        <references>
        </references>
      </script>
    </implementation>
  </interface>
  <interface name="IScriptableCompound">
    <implementation assembly="Compound_Script.dll">
      <script name="Compound_Script.txt">
        <references>
        </references>
      </script>
    </implementation>
  </interface>
  <interface name="IScriptableQuantifierIon">
    <implementation assembly="QuantifierIon_Script.dll">
      <script name="QuantifierIon_Script.txt">
        <references>
        </references>
      </script>
    </implementation>
  </interface>
  <interface name="IScriptableQualifierIon">
    <implementation assembly="QualifierIon_Script.dll">
      <script name="QualifierIon_Script.txt">
        <references>
        </references>
      </script>
    </implementation>
  </interface>
</components>

Fullscreen Batch_Script.txt Download

using System;
using Agilent.MassSpectrometry.DataAnalysis.Quantitative;

namespace ScriptTest
{
    internal class Batch_Script
    {
    }

    public class ScriptableBatch : IScriptableBatch
    {
        public void _OnBatchAnalysisStarting(QuantitationDataSet dataSet, short batchId)
        {
            // ALS Implementation
        }

        public void _OnBatchAnalyzed(QuantitationDataSet dataSet, short batchId)
        {
            // ALS Implementation
        }

        public void _OnBatchLoaded(QuantitationDataSet dataSet, short batchId)
        {
            // ALS Implementation
        }
    }
}

Children

0 CBM over 1 year ago in reply to PavelK

Thank you for sharing the testing script, I learned a lot, and I was able to get the same error as you in MH Quant v11.1 and no errors in MH Quant v10.2.

It seems all .NET Framework 4.X should use "v4.0" as "CompilerVersion", as no other "4.X" is valid: see "system/codedom/compiler/RedistVersionInfo.cs" at the Microsoft Github (My original reply got flagged due to linking to GitHub, so I might have replied twice.)

So I don't know of a way to fix this, as some Agilent code must be selecting an invalid "CompilerVersion". And unfortunately, only versions "v2.0" and "v3.5" performs a registry lookup, and they're likely using some 4.X as "howard_sanford" mentioned.

It seems MH v12.0 is released or about to be released (MH Quant v11.1 has moved to "Previous Versions" on my subscribenet) - so hopefully someone actually tested this code, and fixed the issue.
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0 PavelK over 1 year ago in reply to CBM

Thank you for trying it, yes we think something is wrong with mh 11.1, i hope it will be fixed. If you find something how to fix it pls let me know, i will do same :-)
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0 CBM over 1 year ago in reply to PavelK

Unfortunately, this remains broken in MassHunter Quant v12.0.

howard_sanford , do I need to reach out to my local support team, or can you log the error? This is not a .NET Framework issue, this is MH Quant using an invalid "CompilerVersion" when "System.CodeCom.Compiler.GetCompilerPath" is being called. I believe the correct "CompilerVersion" would be "v4.0" for ALL "v4.X"
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0 howard_sanford over 1 year ago in reply to CBM

CBM and PavelK ,

The issue has been duplicated by product support. Once there is an update or resolution I will post more information.
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0 CBM over 1 year ago in reply to howard_sanford

Perfect, thank you.
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0 PavelK 4 months ago in reply to howard_sanford

hello Howard,
can i ask you, if u have any news about this topic? Is it working on latest version of MH?
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