We are encountering an issue where some very low abundance compounds look like MS/MS was attemptedto be acquired but the MS/MS spectra is empty (6546 QTOF).
This causes the following error when trying to generate a compound report using a custom template made in report builder. We have used the same report sucesfully for several years on a 6545 QTOF without this issue.
I've tried altering the data binding with a number of combinations to exclude these compounds but it doiesn't seem to have an impact.
Any chance you could take a look howard_sanford