Getting the full LCMS data in text format

Hi all,

I would like to obtain my LCMS data, specifically both DAD intensity and m/z intensity at every time point, in a CSV/txt format or a similar format. Is it possible to export the data in this manner? Additionally, is there a way to include this export in the processing method? I will need to perform this task for dozens of samples simultaneously. I am using OpenLab CDS.

Thanks!

Lucas

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0 martin.adams 4 months ago

Hello,

If you are asking about exporting the raw data points as a CSV file that is possible for the chromatograms both collected and extracted but not the spectra. If by time point you mean RT of a peak, then as the other reply states you would need to build an IR report and create a CSV from it. This is for OpenLab CDS 2.x, the answer would be different for Chemstation as the process is manual in that software.

Marty
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0 lucasdada 4 months ago in reply to martin.adams

Hi Martin, thanks for the answer! Unfortunatelly, I also need the full MS(+&-) spectra data for all the chromatogram. I've tried it with the CSV pluging but as you mention is not possible for the spectra data and then I got stuck.
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0 lucasdada 4 months ago in reply to martin.adams

Hi Martin, thanks for the answer! Unfortunatelly, I also need the full MS(+&-) spectra data for all the chromatogram. I've tried it with the CSV pluging but as you mention is not possible for the spectra data and then I got stuck.
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0 martin.adams 4 months ago in reply to lucasdada

Hello,

I am not sure what you are doing with the data but the closest thing to a universal format that can be exported with the spectral data is AIA(netCDF) format.

Marty
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