I wanted to follow-up with you since it has been a while and it doesn't look like there has been any activity on this thread. Do you still require any assistance answering this question? If so, then please let us know and we would be happy to continue working with you.
If you managed to find a resolution on your own, would you mind returning to this thread and posting the "Correct Answer" in a reply?
I also added tags to this thread to make it easier to find.
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In addition to running a script to get a ,CEF file you can export the Component/hits to a library (.mslibrary.xml format), .CSV file or Quant method. To do this go to the "Components" window, pull up the right click menu. and select "Export". Then look to the "Export to:" drop-down to select the export format..
I just wanted to follow-up to see if tom_barrett's above reply answered your question. If so, please come back to the post and click the "Correct Answer" button on the response that helped so it will make the solution more visible. If you still need help, just let us know and we would be happy to continue working with you.