OL2.4 / Compound Custom Fields for Unknown peaks

Hi!

One more question about CC-s. I want to create a cc, that checks if the given compound is below it's specification limit or not, less than LOQ and etc...  with named compound it works like a charm, i give all the required parameters in compound CFs, but for the unknowns it does not work. I've created a timed group for them (peaks calculated individually), but the OL can not use the values given to the unknown group. What is the solution? Right now, i use the sample_label for adding extra parameters for the whole seq, like loq for unkowns.. but it's not so elegant. Any idea?

Thx,

Peter

  • I think i have the solution. I've created a CC that extracts the timed group's parameters:  if(compound_type=3,CurrentPeakOrGroup.GetCustomField("cc_name"),0), then the sum/max of this cc can be used in case of unknown type peaks  max("cc_extractor",CurrentInjection.AllTimedGroups) . At type=1 peaks the original compCF is used. :)  I'm happy with this.

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